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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836117.1_cds_XP_016506193.1_19443
CDS Infomation

[gene=LOC107823992] [db_xref=GeneID:107823992] [protein=vacuolar cation/proton exchanger 3-like isoform X2] [protein_id=XP_016506193.1] [location=complement(join(11858..11889,12030..12120,12896..13012,13569..13622,13731..13847,13999..14121,14340..14564,15202..15398,15509..15537,15648..15715,16271..16525))] [gbkey=CDS]
Sequence

ATGGGTTCTCTAAGTGATTTGGAGAATGGAGAAATTAATAAAAAAGAGCAAGAATTCATC
AAAAAGAATGCACAAAATTTGTCAAATTCAATGATGAGGAAAAAATCGGATCCAGAACTT
GTATCAAAAATTCGTTTTAAGAAGCTCAGAGAAATCTTGGGTAATCTTCAAGAGGTTATA
TTAGGAACAAAGCTTTGTTTGCTCTTTCCAGTTATCCCTTTGGCAATGCTAGCTCAATAC
TATCATTTTGCAAGACCCTGGATTTTTGCGTTTAGTTTACTTGGACTTGCACCGCTTGCT
GAACGTGTCAGCTTCTTGACTGAACAAATTGCTTACTTCACTGGTCCAACAGTTGGGGGT
CTATTAAATGCAACATGTGGAAATGCAACAGAGATGATAATAGCATTACTTGCTCTTTAC
CAAAGGAAAATACATGTTCTAAAGTATTCTCTATTGGGATCTATTCTTTCCAATCTTCTT
CTTGTTCTTGGAAGCTCTCTTCTTTGTGGAGGATTGACCAACCTTAAAAAGGAACAAAGA
TTTGACAGGGGACAAGCTGATGTAAACTCAGTTCTCCTTTTACTGGGATTGCTTTGCCAC
ATGTTGCCACTGATGTATAGATTGTCTGTGGAGCCAGCACTAATTAACAATAATGTAACA
ACTTCAATATTGGGGTTGTCTAGAGTTAGCAGCATTTGTATGCTTGTAGCATATGCAGCT
TATCTCTTCTTTCAACTGCGAACACACAGACAAATGTTTGAATCGTCCGAGGAGGAGGAA
GAAGATAAAGTTGCGGGAGATGAGGCGGTGATTGGTTTTTGGAGTTCATTTGCTTGGTTG
ATTGGCATGACAATTACTATTGCTATATTATCAGAGTACGTCGTGGGTACAATTGAGGAT
GCATCAGATTCTTGGGGCATTTCAGTGAGTTTCATAAGTTTAATATTGTTGCCAATAGTT
GGAAATGCAGCAGAACATGCTGGATCCATCATATTTGCTTTAAAAAACAAGTTGGATATA
TCTCTAGGTGTTGCCTTGGGATCAGCTTCTCAGATTTCCATGTTTGTGGTACCTTTATGT
GTCATTGTGGGATGGATAATTGGTGTGGATATGGATTTGGACTTCAGCCTGCTTGAAACT
GGTTCCCTTGCTTTCTCAATTCTTCTCATTGCCTTCACCTTGCAGGATGGAACCTCACAT
TACATGAAAGGAGTGGTTCTATGTCTTGCCTATTGTGCCATTGCTGCCTGTTTCTTTTTC
CATAAGCTTCCCATCAGGAACAATTCATCTGGGAGCTCGGCCGCTTAA

Peptide Sequence

PEP ID

XP_016506193.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 3-like isoform X2 [Nicotiana tabacum]
Sequence

MGSLSDLENGEINKKEQEFIKKNAQNLSNSMMRKKSDPELVSKIRFKKLREILGNLQEVI
LGTKLCLLFPVIPLAMLAQYYHFARPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGG
LLNATCGNATEMIIALLALYQRKIHVLKYSLLGSILSNLLLVLGSSLLCGGLTNLKKEQR
FDRGQADVNSVLLLLGLLCHMLPLMYRLSVEPALINNNVTTSILGLSRVSSICMLVAYAA
YLFFQLRTHRQMFESSEEEEEDKVAGDEAVIGFWSSFAWLIGMTITIAILSEYVVGTIED
ASDSWGISVSFISLILLPIVGNAAEHAGSIIFALKNKLDISLGVALGSASQISMFVVPLC
VIVGWIIGVDMDLDFSLLETGSLAFSILLIAFTLQDGTSHYMKGVVLCLAYCAIAACFFF
HKLPIRNNSSGSSAA

Transcript Sequence

Gene sequence data has not been registered.